PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.3G229900.4.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 432aa    MW: 48135.2 Da    PI: 6.8888
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.3G229900.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1361.5e-11119148433
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 
                          k err+++NReAAr+sR+RKka++++Le+
  Sevir.3G229900.4.p 119 AKTERRLAQNREAARKSRLRKKAYVQQLET 148
                         799*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-6116192IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.312118161IPR004827Basic-leucine zipper domain
PfamPF001701.4E-8119149IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.7E-7120162No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-7120149No hitNo description
PROSITE patternPS000360123138IPR004827Basic-leucine zipper domain
PfamPF141442.3E-28200275IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MYAAAGYLAA RPPTLEIFPS WPMSHLQQPY SGNSHSVGST SESSSGQNAM PQAELVSPGS  60
MRADSGQQQE VLMVTVDDYN YEQGLGVAAT TAPIFQQHTE SQDKRKQGST RKDGKLLDAK  120
TERRLAQNRE AARKSRLRKK AYVQQLETSR IRLQQIEQEL QGARSQGLFP GGGSASGDMN  180
SGALMFDMEY ARWLEDDSKH MTQLQGILQA QNIDANLGTI VEECMRHYDE LFHLRAMLAR  240
SDVFHLMTGL WATTAERCFL WMGGFRPSEI LKMLIPQLDP LTEQQLLGMC NLQRSSEQTE  300
EALVQGLQQL HKSLADAVGA SPLSDGANVA NYTALMALAL DRLDTLESFY RQADNLRQQT  360
LHHMRRLLTT RQTARCFLSI GEYHRRLRAL SSVWASRPLE SFVAAAENVS PTGTAEQAIH  420
HPYHQSQFSG F*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012699864.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X2
SwissprotO241601e-111TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
SwissprotP239231e-112HBP1B_WHEAT; Transcription factor HBP-1b(c38)
SwissprotQ415581e-111HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLK3Z6D70.0K3Z6D7_SETIT; Uncharacterized protein
STRINGSi022106m0.0(Setaria italica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-127bZIP family protein